gojogo says:I had something like this also and you definitely need to get it checked. In my case, too tight laces and running downhill irritated an arthritic spur from an old hockey injury. My doctor said it will hurt if irritated but I am doing no further damage by running, so somehow that makes the pain ok.
Now I am using the lacing technique on the far left of the picture heading up the article linked to above, ie criss cross to the middle, straight up the sides where the irritation is, then criss cross to the 2nd from top and straight to the very last hole which is usually slightly to the side. The last bit makes the shoe feel much more secure even though the laces are loose across the top.
Good luck!